Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 AC018470.1-201ENST00000624790 3129 ntBASIC17.04■□□□□ 0.32
SOX30O94993 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SOX30O94993 RCN1P1-201ENST00000400413 996 ntBASIC17.04■□□□□ 0.32
SOX30O94993 ECEL1P2-202ENST00000465689 757 ntBASIC17.04■□□□□ 0.32
SOX30O94993 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 AC010240.3-201ENST00000607688 395 ntBASIC17.04■□□□□ 0.32
SOX30O94993 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SOX30O94993 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX30O94993 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX30O94993 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 PCDHB18P-201ENST00000524813 2368 ntBASIC17.03■□□□□ 0.32
SOX30O94993 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.03■□□□□ 0.32
SOX30O94993 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX30O94993 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SOX30O94993 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX30O94993 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SOX30O94993 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX30O94993 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.02■□□□□ 0.32
SOX30O94993 AC009947.2-201ENST00000444014 672 ntBASIC17.02■□□□□ 0.32
SOX30O94993 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.02■□□□□ 0.32
SOX30O94993 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX30O94993 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX30O94993 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SOX30O94993 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX30O94993 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.02■□□□□ 0.31
SOX30O94993 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SOX30O94993 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SOX30O94993 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
SOX30O94993 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SOX30O94993 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.02■□□□□ 0.31
SOX30O94993 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SOX30O94993 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX30O94993 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
SOX30O94993 INGX-201ENST00000359239 846 ntBASIC17.01■□□□□ 0.31
SOX30O94993 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms