Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
USP1O94782 MIR149-201ENST00000384879 89 ntBASIC18.51■□□□□ 0.55
USP1O94782 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 SLC25A6P5-201ENST00000435663 894 ntBASIC18.51■□□□□ 0.55
USP1O94782 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 WWOX-216ENST00000569818 525 ntBASIC18.51■□□□□ 0.55
USP1O94782 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP1O94782 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.51■□□□□ 0.55
USP1O94782 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.51■□□□□ 0.55
USP1O94782 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP1O94782 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 SDHAP2-201ENST00000455183 2001 ntBASIC18.5■□□□□ 0.55
USP1O94782 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.5■□□□□ 0.55
USP1O94782 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 CCR12P-201ENST00000446203 998 ntBASIC18.5■□□□□ 0.55
USP1O94782 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 FITM1-202ENST00000559294 800 ntBASIC18.5■□□□□ 0.55
USP1O94782 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
USP1O94782 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 CR769767.2-201ENST00000622735 460 ntBASIC18.5■□□□□ 0.55
USP1O94782 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.5■□□□□ 0.55
USP1O94782 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.5■□□□□ 0.55
USP1O94782 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 AC009102.3-201ENST00000623118 1491 ntBASIC18.5■□□□□ 0.55
USP1O94782 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP1O94782 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 AC092338.2-201ENST00000568827 1415 ntBASIC18.49■□□□□ 0.55
USP1O94782 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 AP000525.1-201ENST00000608286 694 ntBASIC18.49■□□□□ 0.55
USP1O94782 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.49■□□□□ 0.55
USP1O94782 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms