Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.48■□□□□ 0.23
PTP4A3O75365 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTP4A3O75365 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.48■□□□□ 0.23
PTP4A3O75365 AC007663.1-201ENST00000438948 1240 ntBASIC16.48■□□□□ 0.23
PTP4A3O75365 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.48■□□□□ 0.23
PTP4A3O75365 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.48■□□□□ 0.23
PTP4A3O75365 MIR3180-4-201ENST00000582223 153 ntBASIC16.48■□□□□ 0.23
PTP4A3O75365 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.48■□□□□ 0.23
PTP4A3O75365 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A3O75365 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A3O75365 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTP4A3O75365 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A3O75365 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTP4A3O75365 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 AC006116.8-202ENST00000587620 1550 ntBASIC16.47■□□□□ 0.23
PTP4A3O75365 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTP4A3O75365 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.47■□□□□ 0.23
PTP4A3O75365 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A3O75365 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A3O75365 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A3O75365 CCR12P-201ENST00000446203 998 ntBASIC16.47■□□□□ 0.23
PTP4A3O75365 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.47■□□□□ 0.23
PTP4A3O75365 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A3O75365 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A3O75365 BX088651.1-201ENST00000540551 451 ntBASIC16.47■□□□□ 0.23
PTP4A3O75365 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.47■□□□□ 0.23
PTP4A3O75365 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.47■□□□□ 0.23
PTP4A3O75365 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTP4A3O75365 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PTP4A3O75365 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A3O75365 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A3O75365 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A3O75365 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PTP4A3O75365 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PTP4A3O75365 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A3O75365 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.46■□□□□ 0.23
PTP4A3O75365 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTP4A3O75365 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTP4A3O75365 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTP4A3O75365 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 KRT18P55-202ENST00000578578 1546 ntBASIC16.46■□□□□ 0.23
PTP4A3O75365 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTP4A3O75365 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A3O75365 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.46■□□□□ 0.23
PTP4A3O75365 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A3O75365 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.46■□□□□ 0.23
PTP4A3O75365 AC008550.1-201ENST00000511500 884 ntBASIC16.46■□□□□ 0.23
PTP4A3O75365 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms