Protein–RNA interactions for Protein: O75182

SIN3B, Paired amphipathic helix protein Sin3b, humanhuman

Predictions only

Length 1,162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3BO75182 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.6
SIN3BO75182 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.83■□□□□ 0.6
SIN3BO75182 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.6
SIN3BO75182 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIN3BO75182 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
SIN3BO75182 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SIN3BO75182 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.83■□□□□ 0.6
SIN3BO75182 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.82■□□□□ 0.6
SIN3BO75182 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIN3BO75182 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 PCDHB18P-201ENST00000524813 2368 ntBASIC18.82■□□□□ 0.6
SIN3BO75182 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.82■□□□□ 0.6
SIN3BO75182 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIN3BO75182 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.82■□□□□ 0.6
SIN3BO75182 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.82■□□□□ 0.6
SIN3BO75182 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIN3BO75182 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIN3BO75182 AL354751.1-201ENST00000412768 1863 ntBASIC18.82■□□□□ 0.6
SIN3BO75182 AC034236.2-201ENST00000606662 1610 ntBASIC18.82■□□□□ 0.6
SIN3BO75182 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 AC073592.3-201ENST00000625118 1834 ntBASIC18.81■□□□□ 0.6
SIN3BO75182 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.81■□□□□ 0.6
SIN3BO75182 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SIN3BO75182 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.81■□□□□ 0.6
SIN3BO75182 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.81■□□□□ 0.6
SIN3BO75182 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.81■□□□□ 0.6
SIN3BO75182 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SIN3BO75182 AL136038.4-201ENST00000603606 1261 ntBASIC18.81■□□□□ 0.6
SIN3BO75182 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
SIN3BO75182 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
SIN3BO75182 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
SIN3BO75182 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
SIN3BO75182 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIN3BO75182 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
SIN3BO75182 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.8■□□□□ 0.6
SIN3BO75182 HLA-F-220ENST00000434407 884 ntBASIC18.8■□□□□ 0.6
SIN3BO75182 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.8■□□□□ 0.6
SIN3BO75182 AC138932.1-201ENST00000534164 6830 ntBASIC18.8■□□□□ 0.6
SIN3BO75182 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
SIN3BO75182 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SIN3BO75182 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
SIN3BO75182 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
SIN3BO75182 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SIN3BO75182 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
SIN3BO75182 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIN3BO75182 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SIN3BO75182 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIN3BO75182 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIN3BO75182 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.79■□□□□ 0.6
SIN3BO75182 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIN3BO75182 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIN3BO75182 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SIN3BO75182 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.79■□□□□ 0.6
SIN3BO75182 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
SIN3BO75182 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms