Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
URB1O60287 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
URB1O60287 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.25■□□□□ 0.35
URB1O60287 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.25■□□□□ 0.35
URB1O60287 AC040169.1-201ENST00000565382 521 ntBASIC17.25■□□□□ 0.35
URB1O60287 AL596442.2-201ENST00000610240 980 ntBASIC17.25■□□□□ 0.35
URB1O60287 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
URB1O60287 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.25■□□□□ 0.35
URB1O60287 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.25■□□□□ 0.35
URB1O60287 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
URB1O60287 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
URB1O60287 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.24■□□□□ 0.35
URB1O60287 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.24■□□□□ 0.35
URB1O60287 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.24■□□□□ 0.35
URB1O60287 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
URB1O60287 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 RPS2P28-201ENST00000314255 741 ntBASIC17.24■□□□□ 0.35
URB1O60287 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 FGFR3P6-201ENST00000457012 610 ntBASIC17.24■□□□□ 0.35
URB1O60287 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.24■□□□□ 0.35
URB1O60287 AC012640.2-201ENST00000561606 901 ntBASIC17.24■□□□□ 0.35
URB1O60287 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.24■□□□□ 0.35
URB1O60287 AC008735.5-201ENST00000623544 497 ntBASIC17.24■□□□□ 0.35
URB1O60287 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.24■□□□□ 0.35
URB1O60287 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.24■□□□□ 0.35
URB1O60287 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
URB1O60287 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.23■□□□□ 0.35
URB1O60287 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.23■□□□□ 0.35
URB1O60287 AP001269.4-201ENST00000609611 512 ntBASIC17.23■□□□□ 0.35
URB1O60287 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
URB1O60287 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.23■□□□□ 0.35
URB1O60287 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.23■□□□□ 0.35
URB1O60287 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.23■□□□□ 0.35
URB1O60287 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 MIR3180-4-201ENST00000582223 153 ntBASIC17.23■□□□□ 0.35
URB1O60287 AC005336.2-201ENST00000593183 939 ntBASIC17.23■□□□□ 0.35
URB1O60287 MTDHP5-201ENST00000598980 586 ntBASIC17.23■□□□□ 0.35
URB1O60287 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.23■□□□□ 0.35
URB1O60287 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.23■□□□□ 0.35
URB1O60287 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.23■□□□□ 0.35
URB1O60287 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
URB1O60287 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.23■□□□□ 0.35
URB1O60287 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
URB1O60287 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 AC034236.2-201ENST00000606662 1610 ntBASIC17.22■□□□□ 0.35
URB1O60287 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
URB1O60287 FZD10-202ENST00000539839 3282 ntBASIC17.22■□□□□ 0.35
URB1O60287 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
URB1O60287 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
URB1O60287 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.22■□□□□ 0.35
URB1O60287 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.22■□□□□ 0.35
URB1O60287 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.22■□□□□ 0.35
URB1O60287 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.22■□□□□ 0.35
URB1O60287 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.22■□□□□ 0.35
URB1O60287 Z83851.2-201ENST00000609564 659 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms