Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 AL096828.2-201ENST00000567259 1965 ntBASIC17.48■□□□□ 0.39
PCDH7O60245 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDH7O60245 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH7O60245 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.48■□□□□ 0.39
PCDH7O60245 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PCDH7O60245 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH7O60245 PHGDH-209ENST00000641074 1780 ntBASIC17.48■□□□□ 0.39
PCDH7O60245 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDH7O60245 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDH7O60245 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 AC138028.4-201ENST00000564984 1845 ntBASIC17.47■□□□□ 0.39
PCDH7O60245 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDH7O60245 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 ECEL1P2-202ENST00000465689 757 ntBASIC17.47■□□□□ 0.39
PCDH7O60245 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDH7O60245 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH7O60245 FAM87A-204ENST00000613235 858 ntBASIC17.47■□□□□ 0.39
PCDH7O60245 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 AC067852.2-201ENST00000590513 2313 ntBASIC17.47■□□□□ 0.39
PCDH7O60245 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDH7O60245 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH7O60245 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH7O60245 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PCDH7O60245 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 HMGA1P5-201ENST00000412453 271 ntBASIC17.46■□□□□ 0.39
PCDH7O60245 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDH7O60245 AC009947.2-201ENST00000444014 672 ntBASIC17.46■□□□□ 0.39
PCDH7O60245 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
PCDH7O60245 MIR3180-4-201ENST00000582223 153 ntBASIC17.46■□□□□ 0.39
PCDH7O60245 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH7O60245 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH7O60245 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDH7O60245 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDH7O60245 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms