Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.85■□□□□ 0.45
PEX1O43933 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PEX1O43933 AC116562.2-201ENST00000507042 360 ntBASIC17.85■□□□□ 0.45
PEX1O43933 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.85■□□□□ 0.45
PEX1O43933 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.85■□□□□ 0.45
PEX1O43933 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.85■□□□□ 0.45
PEX1O43933 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.85■□□□□ 0.45
PEX1O43933 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
PEX1O43933 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PEX1O43933 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PEX1O43933 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PEX1O43933 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.84■□□□□ 0.45
PEX1O43933 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PEX1O43933 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 PKD1P1-201ENST00000458669 6805 ntBASIC17.84■□□□□ 0.45
PEX1O43933 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.84■□□□□ 0.45
PEX1O43933 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.84■□□□□ 0.45
PEX1O43933 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.84■□□□□ 0.45
PEX1O43933 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.84■□□□□ 0.45
PEX1O43933 AP000525.1-201ENST00000608286 694 ntBASIC17.84■□□□□ 0.45
PEX1O43933 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 OR6D1P-202ENST00000641007 5290 ntBASIC17.84■□□□□ 0.45
PEX1O43933 SDHAP1-207ENST00000440850 2000 ntBASIC17.84■□□□□ 0.45
PEX1O43933 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.84■□□□□ 0.45
PEX1O43933 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PEX1O43933 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PEX1O43933 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PEX1O43933 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.83■□□□□ 0.45
PEX1O43933 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PEX1O43933 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PEX1O43933 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PEX1O43933 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PEX1O43933 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PEX1O43933 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 AC131212.4-201ENST00000623606 975 ntBASIC17.83■□□□□ 0.44
PEX1O43933 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 AC104417.2-201ENST00000562989 1793 ntBASIC17.83■□□□□ 0.44
PEX1O43933 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.83■□□□□ 0.44
PEX1O43933 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.83■□□□□ 0.44
PEX1O43933 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
PEX1O43933 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PEX1O43933 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PEX1O43933 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms