Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
VEGFDO43915 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VEGFDO43915 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
VEGFDO43915 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VEGFDO43915 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 CHCHD2P8-201ENST00000429873 447 ntBASIC17.91■□□□□ 0.46
VEGFDO43915 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.91■□□□□ 0.46
VEGFDO43915 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.91■□□□□ 0.46
VEGFDO43915 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VEGFDO43915 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.91■□□□□ 0.46
VEGFDO43915 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.91■□□□□ 0.46
VEGFDO43915 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VEGFDO43915 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VEGFDO43915 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.91■□□□□ 0.46
VEGFDO43915 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.91■□□□□ 0.46
VEGFDO43915 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VEGFDO43915 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.9■□□□□ 0.46
VEGFDO43915 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.9■□□□□ 0.46
VEGFDO43915 GUSBP12-201ENST00000513727 720 ntBASIC17.9■□□□□ 0.46
VEGFDO43915 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VEGFDO43915 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.9■□□□□ 0.46
VEGFDO43915 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 ATP5G2P1-201ENST00000433580 426 ntBASIC17.89■□□□□ 0.45
VEGFDO43915 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.89■□□□□ 0.45
VEGFDO43915 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.89■□□□□ 0.45
VEGFDO43915 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.89■□□□□ 0.45
VEGFDO43915 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.89■□□□□ 0.45
VEGFDO43915 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.89■□□□□ 0.45
VEGFDO43915 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VEGFDO43915 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VEGFDO43915 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VEGFDO43915 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VEGFDO43915 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VEGFDO43915 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 TSPY12P-201ENST00000421279 868 ntBASIC17.88■□□□□ 0.45
VEGFDO43915 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.88■□□□□ 0.45
VEGFDO43915 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
VEGFDO43915 AC093458.2-201ENST00000623150 629 ntBASIC17.88■□□□□ 0.45
VEGFDO43915 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VEGFDO43915 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VEGFDO43915 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VEGFDO43915 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms