Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PAX4O43316 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PAX4O43316 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.08□□□□□ -0.32
PAX4O43316 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PAX4O43316 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PAX4O43316 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PAX4O43316 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
PAX4O43316 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PAX4O43316 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.08□□□□□ -0.32
PAX4O43316 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PAX4O43316 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.07□□□□□ -0.32
PAX4O43316 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.07□□□□□ -0.32
PAX4O43316 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 CR769767.2-201ENST00000622735 460 ntBASIC13.07□□□□□ -0.32
PAX4O43316 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
PAX4O43316 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PAX4O43316 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PAX4O43316 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.06□□□□□ -0.32
PAX4O43316 AL138781.2-201ENST00000617896 1843 ntBASIC13.06□□□□□ -0.32
PAX4O43316 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 KRT8P45-201ENST00000414328 1447 ntBASIC13.06□□□□□ -0.32
PAX4O43316 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 AP000593.1-201ENST00000393668 712 ntBASIC13.06□□□□□ -0.32
PAX4O43316 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.06□□□□□ -0.32
PAX4O43316 KRT18P23-201ENST00000435622 1283 ntBASIC13.06□□□□□ -0.32
PAX4O43316 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.06□□□□□ -0.32
PAX4O43316 WWOX-216ENST00000569818 525 ntBASIC13.06□□□□□ -0.32
PAX4O43316 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 FAM87A-204ENST00000613235 858 ntBASIC13.06□□□□□ -0.32
PAX4O43316 AC005363.2-201ENST00000618631 242 ntBASIC13.06□□□□□ -0.32
PAX4O43316 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PAX4O43316 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PAX4O43316 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PAX4O43316 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PAX4O43316 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PAX4O43316 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.06□□□□□ -0.32
PAX4O43316 LETM1P2-201ENST00000597330 2178 ntBASIC13.05□□□□□ -0.32
PAX4O43316 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PAX4O43316 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PAX4O43316 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PAX4O43316 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.05□□□□□ -0.32
PAX4O43316 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms