Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
MID1O15344 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.28■□□□□ 0.52
MID1O15344 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.27■□□□□ 0.52
MID1O15344 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
MID1O15344 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.27■□□□□ 0.52
MID1O15344 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MID1O15344 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
MID1O15344 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.27■□□□□ 0.52
MID1O15344 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.27■□□□□ 0.52
MID1O15344 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
MID1O15344 AL031008.1-201ENST00000619963 541 ntBASIC18.27■□□□□ 0.52
MID1O15344 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.27■□□□□ 0.52
MID1O15344 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MID1O15344 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MID1O15344 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MID1O15344 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MID1O15344 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MID1O15344 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.51
MID1O15344 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MID1O15344 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MID1O15344 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
MID1O15344 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 KRT8P10-201ENST00000450021 1447 ntBASIC18.26■□□□□ 0.51
MID1O15344 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 AC079781.3-201ENST00000449110 356 ntBASIC18.26■□□□□ 0.51
MID1O15344 FDX1P1-201ENST00000449115 551 ntBASIC18.26■□□□□ 0.51
MID1O15344 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.26■□□□□ 0.51
MID1O15344 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.26■□□□□ 0.51
MID1O15344 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.26■□□□□ 0.51
MID1O15344 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 LINC01126-201ENST00000623515 1646 ntBASIC18.26■□□□□ 0.51
MID1O15344 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.26■□□□□ 0.51
MID1O15344 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MID1O15344 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MID1O15344 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.25■□□□□ 0.51
MID1O15344 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.25■□□□□ 0.51
MID1O15344 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MID1O15344 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MID1O15344 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MID1O15344 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.25■□□□□ 0.51
MID1O15344 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MID1O15344 AL353801.3-201ENST00000609898 542 ntBASIC18.25■□□□□ 0.51
MID1O15344 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.25■□□□□ 0.51
MID1O15344 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.25■□□□□ 0.51
MID1O15344 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.25■□□□□ 0.51
MID1O15344 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms