Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TO15178 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
TO15178 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 MIR1224-201ENST00000408193 85 ntBASIC16.83■□□□□ 0.28
TO15178 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.83■□□□□ 0.28
TO15178 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.83■□□□□ 0.28
TO15178 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TO15178 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
TO15178 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.83■□□□□ 0.28
TO15178 AC093677.2-201ENST00000600169 1863 ntBASIC16.83■□□□□ 0.28
TO15178 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.83■□□□□ 0.28
TO15178 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
TO15178 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TO15178 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TO15178 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.82■□□□□ 0.28
TO15178 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
TO15178 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.82■□□□□ 0.28
TO15178 KRT18P48-201ENST00000434763 852 ntBASIC16.82■□□□□ 0.28
TO15178 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.82■□□□□ 0.28
TO15178 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.82■□□□□ 0.28
TO15178 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.82■□□□□ 0.28
TO15178 VENTXP5-201ENST00000523979 775 ntBASIC16.82■□□□□ 0.28
TO15178 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.82■□□□□ 0.28
TO15178 AC010331.1-201ENST00000611423 582 ntBASIC16.82■□□□□ 0.28
TO15178 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.82■□□□□ 0.28
TO15178 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TO15178 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TO15178 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TO15178 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TO15178 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.82■□□□□ 0.28
TO15178 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TO15178 AC099343.3-201ENST00000605834 2503 ntBASIC16.81■□□□□ 0.28
TO15178 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
TO15178 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TO15178 BICD1-207ENST00000551848 1962 ntBASIC16.81■□□□□ 0.28
TO15178 AC104581.1-202ENST00000635932 2618 ntBASIC16.81■□□□□ 0.28
TO15178 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
TO15178 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
TO15178 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.81■□□□□ 0.28
TO15178 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.81■□□□□ 0.28
TO15178 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.81■□□□□ 0.28
TO15178 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.81■□□□□ 0.28
TO15178 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.81■□□□□ 0.28
TO15178 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.81■□□□□ 0.28
TO15178 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TO15178 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TO15178 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.8■□□□□ 0.28
TO15178 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TO15178 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
TO15178 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 PHGDH-209ENST00000641074 1780 ntBASIC16.8■□□□□ 0.28
TO15178 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms