Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 AC063952.2-201ENST00000498792 1227 ntBASIC19.32■□□□□ 0.68
CAPN9O14815 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 MIR3917-201ENST00000580971 93 ntBASIC19.32■□□□□ 0.68
CAPN9O14815 MIR3180-4-201ENST00000582223 153 ntBASIC19.32■□□□□ 0.68
CAPN9O14815 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN9O14815 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN9O14815 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN9O14815 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN9O14815 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CAPN9O14815 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CAPN9O14815 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 AL138781.2-201ENST00000617896 1843 ntBASIC19.31■□□□□ 0.68
CAPN9O14815 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.31■□□□□ 0.68
CAPN9O14815 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 AL359075.1-203ENST00000462729 1002 ntBASIC19.31■□□□□ 0.68
CAPN9O14815 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN9O14815 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN9O14815 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 AC022616.7-201ENST00000525383 220 ntBASIC19.31■□□□□ 0.68
CAPN9O14815 AC099343.3-201ENST00000605834 2503 ntBASIC19.31■□□□□ 0.68
CAPN9O14815 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CAPN9O14815 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN9O14815 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CAPN9O14815 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CAPN9O14815 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN9O14815 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN9O14815 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CAPN9O14815 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CAPN9O14815 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN9O14815 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN9O14815 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN9O14815 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.3■□□□□ 0.68
CAPN9O14815 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CAPN9O14815 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 RASA4DP-201ENST00000460726 1199 ntBASIC19.3■□□□□ 0.68
CAPN9O14815 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN9O14815 AL157888.1-201ENST00000631930 593 ntBASIC19.3■□□□□ 0.68
CAPN9O14815 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN9O14815 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN9O14815 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CAPN9O14815 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN9O14815 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CAPN9O14815 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 STARP1-201ENST00000397973 869 ntBASIC19.29■□□□□ 0.68
CAPN9O14815 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.29■□□□□ 0.68
CAPN9O14815 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.29■□□□□ 0.68
CAPN9O14815 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.29■□□□□ 0.68
CAPN9O14815 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CAPN9O14815 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CAPN9O14815 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CAPN9O14815 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CAPN9O14815 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN9O14815 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPN9O14815 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms