Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD2O14647 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD2O14647 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CHD2O14647 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.3■■□□□ 1.64
CHD2O14647 AD001527.2-201ENST00000622994 785 ntBASIC25.3■■□□□ 1.64
CHD2O14647 AL022326.1-202ENST00000641533 845 ntBASIC25.3■■□□□ 1.64
CHD2O14647 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AC099343.3-201ENST00000605834 2503 ntBASIC25.29■■□□□ 1.64
CHD2O14647 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHD2O14647 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD2O14647 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 AL513190.1-201ENST00000621254 727 ntBASIC25.29■■□□□ 1.64
CHD2O14647 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHD2O14647 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD2O14647 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CHD2O14647 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD2O14647 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CHD2O14647 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 AL078644.1-201ENST00000609881 752 ntBASIC25.28■■□□□ 1.64
CHD2O14647 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 LINC00602-201ENST00000629776 2065 ntBASIC25.28■■□□□ 1.64
CHD2O14647 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD2O14647 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD2O14647 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD2O14647 CRYGEP-201ENST00000412192 528 ntBASIC25.28■■□□□ 1.64
CHD2O14647 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD2O14647 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25.28■■□□□ 1.64
CHD2O14647 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD2O14647 HCG4B-203ENST00000450128 991 ntBASIC25.28■■□□□ 1.64
CHD2O14647 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHD2O14647 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD2O14647 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 TSEN15P1-201ENST00000423257 515 ntBASIC25.27■■□□□ 1.64
CHD2O14647 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.27■■□□□ 1.64
CHD2O14647 AC010460.3-201ENST00000511359 1579 ntBASIC25.27■■□□□ 1.64
CHD2O14647 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD2O14647 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD2O14647 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD2O14647 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD2O14647 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD2O14647 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CHD2O14647 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD2O14647 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CHD2O14647 SNAI3-AS1-205ENST00000568633 2096 ntBASIC25.26■■□□□ 1.63
CHD2O14647 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD2O14647 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CHD2O14647 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD2O14647 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD2O14647 AP000344.2-201ENST00000512987 629 ntBASIC25.26■■□□□ 1.63
CHD2O14647 AP002472.1-201ENST00000577490 586 ntBASIC25.26■■□□□ 1.63
CHD2O14647 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD2O14647 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD2O14647 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms