Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.75■□□□□ 0.43
UBFD1O14562 SLC25A1P2-201ENST00000430693 912 ntBASIC17.75■□□□□ 0.43
UBFD1O14562 RBM17P1-201ENST00000453646 1190 ntBASIC17.75■□□□□ 0.43
UBFD1O14562 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.75■□□□□ 0.43
UBFD1O14562 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBFD1O14562 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.74■□□□□ 0.43
UBFD1O14562 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 AC092338.2-201ENST00000568827 1415 ntBASIC17.74■□□□□ 0.43
UBFD1O14562 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
UBFD1O14562 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
UBFD1O14562 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.74■□□□□ 0.43
UBFD1O14562 WWOX-216ENST00000569818 525 ntBASIC17.74■□□□□ 0.43
UBFD1O14562 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.74■□□□□ 0.43
UBFD1O14562 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.74■□□□□ 0.43
UBFD1O14562 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 AL645608.8-201ENST00000606034 2086 ntBASIC17.74■□□□□ 0.43
UBFD1O14562 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBFD1O14562 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBFD1O14562 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
UBFD1O14562 AL024508.2-201ENST00000607749 1894 ntBASIC17.73■□□□□ 0.43
UBFD1O14562 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBFD1O14562 KRT8P7-201ENST00000533003 1432 ntBASIC17.73■□□□□ 0.43
UBFD1O14562 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
UBFD1O14562 AC139713.2-201ENST00000641328 2723 ntBASIC17.73■□□□□ 0.43
UBFD1O14562 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.73■□□□□ 0.43
UBFD1O14562 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.73■□□□□ 0.43
UBFD1O14562 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBFD1O14562 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBFD1O14562 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.73■□□□□ 0.43
UBFD1O14562 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.73■□□□□ 0.43
UBFD1O14562 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.73■□□□□ 0.43
UBFD1O14562 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.73■□□□□ 0.43
UBFD1O14562 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.73■□□□□ 0.43
UBFD1O14562 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.73■□□□□ 0.43
UBFD1O14562 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.73■□□□□ 0.43
UBFD1O14562 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.73■□□□□ 0.43
UBFD1O14562 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBFD1O14562 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.72■□□□□ 0.43
UBFD1O14562 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.72■□□□□ 0.43
UBFD1O14562 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms