Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DFFAO00273 GMCL1P1-201ENST00000463439 1581 ntBASIC18.82■□□□□ 0.6
DFFAO00273 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.82■□□□□ 0.6
DFFAO00273 AC092647.4-201ENST00000457211 535 ntBASIC18.82■□□□□ 0.6
DFFAO00273 RASA4DP-201ENST00000460726 1199 ntBASIC18.82■□□□□ 0.6
DFFAO00273 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.82■□□□□ 0.6
DFFAO00273 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.82■□□□□ 0.6
DFFAO00273 ESPNP-201ENST00000270691 2015 ntBASIC18.82■□□□□ 0.6
DFFAO00273 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
DFFAO00273 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
DFFAO00273 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.82■□□□□ 0.6
DFFAO00273 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.82■□□□□ 0.6
DFFAO00273 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.81■□□□□ 0.6
DFFAO00273 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 SPDYE15P-201ENST00000424157 909 ntBASIC18.81■□□□□ 0.6
DFFAO00273 AL359075.1-203ENST00000462729 1002 ntBASIC18.81■□□□□ 0.6
DFFAO00273 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DFFAO00273 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
DFFAO00273 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.81■□□□□ 0.6
DFFAO00273 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DFFAO00273 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DFFAO00273 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DFFAO00273 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.81■□□□□ 0.6
DFFAO00273 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 AC135776.1-201ENST00000319817 2481 ntBASIC18.8■□□□□ 0.6
DFFAO00273 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 FAM210CP-201ENST00000445714 574 ntBASIC18.8■□□□□ 0.6
DFFAO00273 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.8■□□□□ 0.6
DFFAO00273 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DFFAO00273 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DFFAO00273 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DFFAO00273 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
DFFAO00273 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DFFAO00273 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DFFAO00273 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DFFAO00273 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
DFFAO00273 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DFFAO00273 DUX4L26-201ENST00000489078 1255 ntBASIC18.79■□□□□ 0.6
DFFAO00273 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.79■□□□□ 0.6
DFFAO00273 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.79■□□□□ 0.6
DFFAO00273 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
DFFAO00273 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DFFAO00273 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms