Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 AC008764.6-201ENST00000595909 2069 ntBASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 AC009102.2-201ENST00000606772 1639 ntBASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 VGF-203ENST00000611537 1622 ntTSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 DUX4L9-201ENST00000449051 1259 ntBASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BX005040.4-201ENST00000637145 1518 ntBASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 PCDHB19P-201ENST00000570871 2371 ntBASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 AC006333.2-201ENST00000607957 2099 ntBASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHKB-CPT1BH3BT56 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 MACF1-219ENST00000484793 834 ntTSL 2 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 AC019171.1-201ENST00000601251 1056 ntBASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms