Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.39□□□□□ -0.27
NACAE9PAV3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.39□□□□□ -0.27
NACAE9PAV3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.39□□□□□ -0.27
NACAE9PAV3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.39□□□□□ -0.27
NACAE9PAV3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NACAE9PAV3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 AC005521.1-201ENST00000393351 872 ntBASIC13.39□□□□□ -0.27
NACAE9PAV3 MIR1238-201ENST00000408483 83 ntBASIC13.39□□□□□ -0.27
NACAE9PAV3 AC004980.1-204ENST00000429707 299 ntBASIC13.39□□□□□ -0.27
NACAE9PAV3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 FAM207BP-201ENST00000447172 505 ntBASIC13.39□□□□□ -0.27
NACAE9PAV3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.39□□□□□ -0.27
NACAE9PAV3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NACAE9PAV3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.39□□□□□ -0.27
NACAE9PAV3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.39□□□□□ -0.27
NACAE9PAV3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NACAE9PAV3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.38□□□□□ -0.27
NACAE9PAV3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 DGCR10-201ENST00000609839 495 ntBASIC13.38□□□□□ -0.27
NACAE9PAV3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NACAE9PAV3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.38□□□□□ -0.27
NACAE9PAV3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 LINC01568-207ENST00000641790 1380 ntBASIC13.38□□□□□ -0.27
NACAE9PAV3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 B3GAT3P1-201ENST00000471720 806 ntBASIC13.38□□□□□ -0.27
NACAE9PAV3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.38□□□□□ -0.27
NACAE9PAV3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 FITM1-202ENST00000559294 800 ntBASIC13.38□□□□□ -0.27
NACAE9PAV3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.38□□□□□ -0.27
NACAE9PAV3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 AL162741.1-201ENST00000565563 1558 ntBASIC13.38□□□□□ -0.27
NACAE9PAV3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NACAE9PAV3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NACAE9PAV3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.37□□□□□ -0.27
NACAE9PAV3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NACAE9PAV3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NACAE9PAV3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NACAE9PAV3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NACAE9PAV3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms