Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C1QTNF9BB2RNN3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF9BB2RNN3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
C1QTNF9BB2RNN3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C1QTNF9BB2RNN3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF9BB2RNN3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 AC018845.2-201ENST00000568326 409 ntBASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 AL138831.2-201ENST00000606564 490 ntBASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 HEIH-201ENST00000623091 1652 ntBASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.12■□□□□ 0.33
C1QTNF9BB2RNN3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AC068472.1-201ENST00000474589 881 ntBASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AL031432.2-201ENST00000566714 459 ntBASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 AL928711.1-201ENST00000570165 459 ntBASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF9BB2RNN3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 AC005225.4-201ENST00000557330 545 ntBASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 Z92544.3-201ENST00000624747 417 ntBASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 PGM5P2-202ENST00000637225 1043 ntBASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 AP000867.4-201ENST00000641616 219 ntBASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C1QTNF9BB2RNN3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms