Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 AC144831.1-201ENST00000573312 2656 ntBASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 MIR4787-201ENST00000607364 84 ntBASIC14.85□□□□□ -0.03
LINC00862A6NCI5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 MIR6724-1-201ENST00000616420 92 ntBASIC14.84□□□□□ -0.03
LINC00862A6NCI5 MIR6724-2-201ENST00000616483 92 ntBASIC14.84□□□□□ -0.03
LINC00862A6NCI5 MIR6724-4-201ENST00000617390 92 ntBASIC14.84□□□□□ -0.03
LINC00862A6NCI5 MIR6724-3-201ENST00000622482 92 ntBASIC14.84□□□□□ -0.03
LINC00862A6NCI5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00862A6NCI5 AC112777.1-201ENST00000540175 1423 ntBASIC14.83□□□□□ -0.03
LINC00862A6NCI5 AC087633.2-202ENST00000565166 1439 ntBASIC14.83□□□□□ -0.03
LINC00862A6NCI5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00862A6NCI5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.83□□□□□ -0.04
LINC00862A6NCI5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00862A6NCI5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms