Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 AC093010.1-201ENST00000473625 1624 ntBASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 HOXB1-202ENST00000577092 1414 ntBASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 ITM2C-210ENST00000620962 501 ntBASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 AL645608.8-201ENST00000606034 2086 ntBASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TCRBV9S1A1TA0A576 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 CRYGFP-201ENST00000418459 633 ntBASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 REXO1L10P-201ENST00000615707 1290 ntBASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 REXO1L12P-201ENST00000622156 912 ntBASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 AC138932.1-201ENST00000534164 6830 ntBASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TCRBV9S1A1TA0A576 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 PP12613-201ENST00000424958 2230 ntBASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 LINC01126-201ENST00000623515 1646 ntBASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV9S1A1TA0A576 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.39■□□□□ 0.54
TCRBV9S1A1TA0A576 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TCRBV9S1A1TA0A576 KRT18P55-202ENST00000578578 1546 ntBASIC18.39■□□□□ 0.54
TCRBV9S1A1TA0A576 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms