Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
TMEM238LA0A1B0GVL6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM238LA0A1B0GVL6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM238LA0A1B0GVL6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL023806.1-201ENST00000603994 1649 ntBASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC138028.4-201ENST00000564984 1845 ntBASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM238LA0A1B0GVL6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SBF1P1-201ENST00000444527 5631 ntBASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 KRT8P17-201ENST00000453110 1448 ntBASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 EEF1DP3-203ENST00000566025 782 ntBASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM238LA0A1B0GVL6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms