Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RPS2P4-201ENST00000476944 856 ntBASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AC004951.3-201ENST00000418645 1148 ntBASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 PHGDH-209ENST00000641074 1780 ntBASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV5A0A0B4J249 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 GMCL1P1-201ENST00000463439 1581 ntBASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PP12613-201ENST00000424958 2230 ntBASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 NIFKP9-201ENST00000419265 221 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms