Protein–RNA interactions for Protein: A0A075B6S2

IGKV2D-29, Immunoglobulin kappa variable 2D-29, humanhuman

Predicted RBP Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-29A0A075B6S2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2D-29A0A075B6S2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2D-29A0A075B6S2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.91□□□□□ -0.34
IGKV2D-29A0A075B6S2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.91□□□□□ -0.34
IGKV2D-29A0A075B6S2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2D-29A0A075B6S2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 AC026366.1-201ENST00000488803 879 ntBASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 AC106820.2-201ENST00000563775 3264 ntBASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2D-29A0A075B6S2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.9□□□□□ -0.35
IGKV2D-29A0A075B6S2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
IGKV2D-29A0A075B6S2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 HTR7P1-201ENST00000538670 1336 ntBASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AC099343.3-201ENST00000605834 2503 ntBASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AC004951.3-201ENST00000418645 1148 ntBASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 NIFKP9-201ENST00000419265 221 ntBASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AP002982.1-201ENST00000492365 877 ntBASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2D-29A0A075B6S2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms