Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC093827.2-201ENST00000512654 315 ntBASIC17.36■□□□□ 0.37
GPC6Q9Y625 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 DGCR10-201ENST00000609839 495 ntBASIC17.36■□□□□ 0.37
GPC6Q9Y625 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 MYC-208ENST00000641036 567 ntBASIC17.36■□□□□ 0.37
GPC6Q9Y625 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 KRT17P2-201ENST00000300992 1314 ntBASIC17.36■□□□□ 0.37
GPC6Q9Y625 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC6Q9Y625 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC6Q9Y625 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 FAM207BP-201ENST00000447172 505 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 SNORA78-201ENST00000459373 127 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 AC011506.1-201ENST00000474329 610 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 MIR4497-201ENST00000583208 89 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 KRT8P45-201ENST00000414328 1447 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 AC112777.1-201ENST00000540175 1423 ntBASIC17.35■□□□□ 0.37
GPC6Q9Y625 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.35■□□□□ 0.37
GPC6Q9Y625 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC6Q9Y625 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 MESTP1-201ENST00000404287 994 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 TSPY7P-201ENST00000431358 1114 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 AP003071.4-201ENST00000562276 1284 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 REXO1L10P-201ENST00000615707 1290 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 REXO1L12P-201ENST00000622156 912 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.34■□□□□ 0.37
GPC6Q9Y625 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GPC6Q9Y625 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC6Q9Y625 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GPC6Q9Y625 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 RCC2P3-201ENST00000418112 1537 ntBASIC17.33■□□□□ 0.37
GPC6Q9Y625 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC6Q9Y625 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms