Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 AL596275.1-201ENST00000423464 877 ntBASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 AC010947.1-201ENST00000623454 693 ntBASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 AL163051.1-201ENST00000569214 1512 ntBASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA11Q9Y5H2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 KRT8P9-201ENST00000558927 1449 ntBASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 AC009065.1-201ENST00000564055 1225 ntBASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 AC066615.1-201ENST00000640911 628 ntBASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA11Q9Y5H2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 HTR7P1-202ENST00000624664 4411 ntBASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 AC135776.1-201ENST00000319817 2481 ntBASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 AC112497.1-201ENST00000624824 639 ntBASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA11Q9Y5H2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms