Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 AC097658.1-201ENST00000475555 843 ntBASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 PNMA6B-201ENST00000538162 1200 ntBASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 ESRRAP1-201ENST00000400596 1257 ntBASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 GCSHP5-201ENST00000443090 522 ntBASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB1Q9Y5G3 LINC00602-201ENST00000629776 2065 ntBASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 AL596275.1-201ENST00000423464 877 ntBASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB1Q9Y5G3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms