Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 AC246785.2-201ENST00000432512 513 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 FDX1P1-201ENST00000449115 551 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 AC068587.9-201ENST00000641814 219 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 KRT8P10-201ENST00000450021 1447 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 IGHGP-201ENST00000390555 1178 ntBASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 VENTXP7-201ENST00000475503 772 ntBASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX2IPQ9Y2D8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 AP000974.1-201ENST00000623909 2387 ntBASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
SSX2IPQ9Y2D8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 KRT18P31-201ENST00000506277 1292 ntBASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 FOSL1P1-201ENST00000511041 816 ntBASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX2IPQ9Y2D8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms