Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT11Q9UKZ1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 AC133561.5-201ENST00000635547 218 ntBASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 AC108860.2-201ENST00000562760 2183 ntBASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT11Q9UKZ1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 AC096733.2-201ENST00000609937 1394 ntBASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 CRYGFP-201ENST00000418459 633 ntBASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 ECEL1P3-201ENST00000427961 737 ntBASIC17.59■□□□□ 0.41
CNOT11Q9UKZ1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms