Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 KRT18P57-201ENST00000443599 1254 ntBASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 AL441883.1-201ENST00000566170 1045 ntBASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 AC011558.1-201ENST00000623459 338 ntBASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 AL157888.1-201ENST00000631930 593 ntBASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN4Q9NRR5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 HTR7P1-202ENST00000624664 4411 ntBASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 PVRIG2P-201ENST00000435460 978 ntBASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 AL354751.1-201ENST00000412768 1863 ntBASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN4Q9NRR5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBQLN4Q9NRR5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 RNF152P1-201ENST00000397754 604 ntBASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 AC117947.1-201ENST00000427448 529 ntBASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 AL390961.4-201ENST00000623958 2535 ntBASIC16.83■□□□□ 0.28
UBQLN4Q9NRR5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN4Q9NRR5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms