Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G1Q9HCP0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 KRT18P65-201ENST00000439811 1286 ntBASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 AC068472.1-201ENST00000474589 881 ntBASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G1Q9HCP0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G1Q9HCP0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC233702.3-201ENST00000578656 1387 ntBASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC120498.9-201ENST00000339021 3867 ntBASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC246785.2-201ENST00000432512 513 ntBASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 TOB2P1-201ENST00000469761 992 ntBASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G1Q9HCP0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1G1Q9HCP0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms