Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 AC093010.1-201ENST00000473625 1624 ntBASIC17.52■□□□□ 0.4
BRF2Q9HAW0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 LINC01568-207ENST00000641790 1380 ntBASIC17.52■□□□□ 0.39
BRF2Q9HAW0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.39
BRF2Q9HAW0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 AC099343.3-201ENST00000605834 2503 ntBASIC17.51■□□□□ 0.39
BRF2Q9HAW0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 AL024508.2-201ENST00000607749 1894 ntBASIC17.51■□□□□ 0.39
BRF2Q9HAW0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 AL133373.2-201ENST00000623187 2828 ntBASIC17.51■□□□□ 0.39
BRF2Q9HAW0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRF2Q9HAW0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 LINC01126-201ENST00000623515 1646 ntBASIC17.5■□□□□ 0.39
BRF2Q9HAW0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 ECEL1P3-201ENST00000427961 737 ntBASIC17.5■□□□□ 0.39
BRF2Q9HAW0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 AC024243.1-201ENST00000609234 778 ntBASIC17.5■□□□□ 0.39
BRF2Q9HAW0 AC092865.7-201ENST00000641832 219 ntBASIC17.5■□□□□ 0.39
BRF2Q9HAW0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.5■□□□□ 0.39
BRF2Q9HAW0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms