Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 MCRIP2P1-201ENST00000394346 511 ntBASIC14.87□□□□□ -0.03
NKX6-2Q9C056 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-2Q9C056 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.85□□□□□ -0.03
NKX6-2Q9C056 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 ZNF815P-204ENST00000434898 1737 ntBASIC14.85□□□□□ -0.03
NKX6-2Q9C056 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-2Q9C056 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-2Q9C056 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms