Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.3■■□□□ 1
SDF4Q9BRK5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SDF4Q9BRK5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 HEIH-201ENST00000623091 1652 ntBASIC21.29■■□□□ 1
SDF4Q9BRK5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.29■■□□□ 1
SDF4Q9BRK5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.29■■□□□ 1
SDF4Q9BRK5 AP000523.1-201ENST00000398242 1049 ntBASIC21.29■■□□□ 1
SDF4Q9BRK5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.29■■□□□ 1
SDF4Q9BRK5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.29■■□□□ 1
SDF4Q9BRK5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.29■■□□□ 1
SDF4Q9BRK5 WWOX-216ENST00000569818 525 ntBASIC21.29■■□□□ 1
SDF4Q9BRK5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.29■■□□□ 1
SDF4Q9BRK5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SDF4Q9BRK5 ABALON-201ENST00000629058 1903 ntBASIC21.29■■□□□ 1
SDF4Q9BRK5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.29■■□□□ 1
SDF4Q9BRK5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SDF4Q9BRK5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.29■■□□□ 1
SDF4Q9BRK5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
SDF4Q9BRK5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 GPAT2P1-201ENST00000444924 1672 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SDF4Q9BRK5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 AC009947.2-201ENST00000444014 672 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.28■■□□□ 1
SDF4Q9BRK5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SDF4Q9BRK5 AC063952.2-201ENST00000498792 1227 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 AC022616.7-201ENST00000525383 220 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 NTF6B-201ENST00000591913 560 ntBASIC21.28■■□□□ 1
SDF4Q9BRK5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.28■■□□□ 1
SDF4Q9BRK5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.28■■□□□ 1
SDF4Q9BRK5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.28■■□□□ 1
SDF4Q9BRK5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDF4Q9BRK5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.27■■□□□ 1
SDF4Q9BRK5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.27■■□□□ 1
SDF4Q9BRK5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.27■■□□□ 1
SDF4Q9BRK5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SDF4Q9BRK5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SDF4Q9BRK5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.27■■□□□ 1
SDF4Q9BRK5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.27■■□□□ 1
SDF4Q9BRK5 TSPY5P-201ENST00000426936 936 ntBASIC21.27■■□□□ 1
SDF4Q9BRK5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.27■■□□□ 1
SDF4Q9BRK5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.27■■□□□ 1
SDF4Q9BRK5 CR769767.2-201ENST00000622735 460 ntBASIC21.27■■□□□ 1
SDF4Q9BRK5 AC011558.1-201ENST00000623459 338 ntBASIC21.27■■□□□ 1
SDF4Q9BRK5 AL023973.1-201ENST00000624619 620 ntBASIC21.27■■□□□ 1
SDF4Q9BRK5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.27■■□□□ 1
SDF4Q9BRK5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.27■■□□□ 1
SDF4Q9BRK5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SDF4Q9BRK5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SDF4Q9BRK5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SDF4Q9BRK5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms