Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.38■□□□□ 0.53
NDNQ99608 AP003041.3-201ENST00000527151 707 ntBASIC18.38■□□□□ 0.53
NDNQ99608 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 AL023803.3-201ENST00000615559 522 ntBASIC18.38■□□□□ 0.53
NDNQ99608 AP006294.2-201ENST00000641667 209 ntBASIC18.38■□□□□ 0.53
NDNQ99608 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 AC090340.1-201ENST00000620778 4980 ntBASIC18.38■□□□□ 0.53
NDNQ99608 KRT8P50-201ENST00000562022 1438 ntBASIC18.38■□□□□ 0.53
NDNQ99608 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 AC009053.2-201ENST00000563701 2365 ntBASIC18.37■□□□□ 0.53
NDNQ99608 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.37■□□□□ 0.53
NDNQ99608 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.37■□□□□ 0.53
NDNQ99608 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.37■□□□□ 0.53
NDNQ99608 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
NDNQ99608 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.37■□□□□ 0.53
NDNQ99608 HTR7P1-202ENST00000624664 4411 ntBASIC18.37■□□□□ 0.53
NDNQ99608 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.37■□□□□ 0.53
NDNQ99608 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDNQ99608 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NDNQ99608 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NDNQ99608 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.36■□□□□ 0.53
NDNQ99608 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.36■□□□□ 0.53
NDNQ99608 TSPY15P-201ENST00000457163 923 ntBASIC18.36■□□□□ 0.53
NDNQ99608 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.36■□□□□ 0.53
NDNQ99608 FITM1-202ENST00000559294 800 ntBASIC18.36■□□□□ 0.53
NDNQ99608 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.36■□□□□ 0.53
NDNQ99608 AC093677.2-201ENST00000600169 1863 ntBASIC18.36■□□□□ 0.53
NDNQ99608 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.36■□□□□ 0.53
NDNQ99608 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDNQ99608 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NDNQ99608 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NDNQ99608 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.35■□□□□ 0.53
NDNQ99608 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NDNQ99608 SLC25A1P2-201ENST00000430693 912 ntBASIC18.35■□□□□ 0.53
NDNQ99608 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.35■□□□□ 0.53
NDNQ99608 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.35■□□□□ 0.53
NDNQ99608 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.35■□□□□ 0.53
NDNQ99608 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NDNQ99608 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NDNQ99608 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 AC124067.4-201ENST00000519691 2379 ntBASIC18.35■□□□□ 0.53
NDNQ99608 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.35■□□□□ 0.53
NDNQ99608 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms