Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 ECEL1P3-201ENST00000427961 737 ntBASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 AL138966.2-201ENST00000621997 464 ntBASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 AC093010.1-201ENST00000473625 1624 ntBASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 AC145285.6-201ENST00000604632 637 ntBASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 KRT18P22-201ENST00000402024 1347 ntBASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB18PQ96TA0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 AIRN-201ENST00000601203 4374 ntBASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 NEK4P2-201ENST00000580004 1012 ntBASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB18PQ96TA0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB18PQ96TA0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.39■□□□□ 0.69
PCDHB18PQ96TA0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms