Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 AC142086.2-201ENST00000569753 217 ntBASIC14.87□□□□□ -0.03
RAB40CQ96S21 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 PCDHA12-202ENST00000613593 2588 ntBASIC14.87□□□□□ -0.03
RAB40CQ96S21 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 CROCCP1-201ENST00000426910 5675 ntBASIC14.86□□□□□ -0.03
RAB40CQ96S21 AC099398.1-201ENST00000567919 2776 ntBASIC14.86□□□□□ -0.03
RAB40CQ96S21 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 AP000593.1-201ENST00000393668 712 ntBASIC14.86□□□□□ -0.03
RAB40CQ96S21 AL355802.2-201ENST00000402069 882 ntBASIC14.86□□□□□ -0.03
RAB40CQ96S21 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 AC069152.1-201ENST00000438030 544 ntBASIC14.86□□□□□ -0.03
RAB40CQ96S21 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40CQ96S21 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40CQ96S21 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 NBPF21P-201ENST00000425093 1451 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 Z85996.1-201ENST00000494644 937 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 AC098934.4-201ENST00000564127 592 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 SOX15-203ENST00000570788 1093 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 MYC-209ENST00000641252 345 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 RCC2P3-201ENST00000418112 1537 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 AC006116.8-202ENST00000587620 1550 ntBASIC14.85□□□□□ -0.03
RAB40CQ96S21 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40CQ96S21 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40CQ96S21 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms