Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 AC092865.7-201ENST00000641832 219 ntBASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 SLC25A3P1-201ENST00000443844 931 ntBASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 AC073912.3-201ENST00000624414 853 ntBASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A4EQ96PG1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 AL096828.2-201ENST00000567259 1965 ntBASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 PHGDH-209ENST00000641074 1780 ntBASIC17.08■□□□□ 0.33
MS4A4EQ96PG1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 AC141257.4-201ENST00000634557 245 ntBASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 AC136944.6-201ENST00000634818 245 ntBASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A4EQ96PG1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
MS4A4EQ96PG1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms