Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 FEM1AP3-201ENST00000403722 1741 ntBASIC13.85□□□□□ -0.19
AP1S3Q96PC3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 MIR6821-201ENST00000617625 74 ntBASIC13.85□□□□□ -0.19
AP1S3Q96PC3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 AL391005.1-201ENST00000623953 2435 ntBASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S3Q96PC3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.83□□□□□ -0.19
AP1S3Q96PC3 AL513477.1-201ENST00000602865 2407 ntBASIC13.83□□□□□ -0.19
AP1S3Q96PC3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms