Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 AC011498.5-201ENST00000592027 486 ntBASIC18.84■□□□□ 0.61
RPRD1AQ96P16 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.84■□□□□ 0.61
RPRD1AQ96P16 AL024508.2-201ENST00000607749 1894 ntBASIC18.84■□□□□ 0.61
RPRD1AQ96P16 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPRD1AQ96P16 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 RNF126P1-202ENST00000569893 925 ntBASIC18.83■□□□□ 0.6
RPRD1AQ96P16 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 AC008687.5-201ENST00000593746 558 ntBASIC18.83■□□□□ 0.6
RPRD1AQ96P16 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 GMCL1P1-201ENST00000463439 1581 ntBASIC18.83■□□□□ 0.6
RPRD1AQ96P16 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.83■□□□□ 0.6
RPRD1AQ96P16 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 UPK3BP1-201ENST00000428678 509 ntBASIC18.82■□□□□ 0.6
RPRD1AQ96P16 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms