Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 AC004980.1-204ENST00000429707 299 ntBASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 PRSS44-201ENST00000515154 1146 ntBASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RCC2P3-201ENST00000418112 1537 ntBASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 RPS2P4-201ENST00000476944 856 ntBASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 AC009053.2-201ENST00000563701 2365 ntBASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC47A1Q96FL8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 RARRES2P10-201ENST00000564312 460 ntBASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SLC47A1Q96FL8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms