Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NCLNQ969V3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCLNQ969V3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NCLNQ969V3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.79■□□□□ 0.44
NCLNQ969V3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.79■□□□□ 0.44
NCLNQ969V3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.79■□□□□ 0.44
NCLNQ969V3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NCLNQ969V3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.79■□□□□ 0.44
NCLNQ969V3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.79■□□□□ 0.44
NCLNQ969V3 CKBP1-201ENST00000565489 1086 ntBASIC17.79■□□□□ 0.44
NCLNQ969V3 AC010947.1-201ENST00000623454 693 ntBASIC17.79■□□□□ 0.44
NCLNQ969V3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NCLNQ969V3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.79■□□□□ 0.44
NCLNQ969V3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.79■□□□□ 0.44
NCLNQ969V3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
NCLNQ969V3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.79■□□□□ 0.44
NCLNQ969V3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCLNQ969V3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NCLNQ969V3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.79■□□□□ 0.44
NCLNQ969V3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.79■□□□□ 0.44
NCLNQ969V3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
NCLNQ969V3 TSPY21P-201ENST00000433481 731 ntBASIC17.78■□□□□ 0.44
NCLNQ969V3 TSPY23P-201ENST00000440136 739 ntBASIC17.78■□□□□ 0.44
NCLNQ969V3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 PRSS44-201ENST00000515154 1146 ntBASIC17.78■□□□□ 0.44
NCLNQ969V3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NCLNQ969V3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NCLNQ969V3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.78■□□□□ 0.44
NCLNQ969V3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLNQ969V3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.77■□□□□ 0.44
NCLNQ969V3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.77■□□□□ 0.44
NCLNQ969V3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NCLNQ969V3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.77■□□□□ 0.44
NCLNQ969V3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NCLNQ969V3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.77■□□□□ 0.44
NCLNQ969V3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLNQ969V3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.77■□□□□ 0.43
NCLNQ969V3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
NCLNQ969V3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLNQ969V3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLNQ969V3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
NCLNQ969V3 LINC01568-207ENST00000641790 1380 ntBASIC17.77■□□□□ 0.43
NCLNQ969V3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.77■□□□□ 0.43
NCLNQ969V3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms