Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 HTR7P1-201ENST00000538670 1336 ntBASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
DNAAF1Q8NEP3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 AC106820.2-201ENST00000563775 3264 ntBASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 AC128676.1-201ENST00000454392 318 ntBASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 AC138028.4-201ENST00000564984 1845 ntBASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
DNAAF1Q8NEP3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AC004951.3-201ENST00000418645 1148 ntBASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MYC-208ENST00000641036 567 ntBASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 AC009053.2-201ENST00000563701 2365 ntBASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.13■□□□□ 0.17
DNAAF1Q8NEP3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 KRT16P1-201ENST00000399124 1418 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 AC112777.1-201ENST00000540175 1423 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms