Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AC116407.4-201ENST00000623319 1061 ntBASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AC018470.1-201ENST00000624790 3129 ntBASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
PCDH20Q8N6Y1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH20Q8N6Y1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 AL645929.1-201ENST00000420084 975 ntBASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH20Q8N6Y1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 MYLKP1-201ENST00000509077 1580 ntBASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 ANO7L1-203ENST00000602586 1720 ntBASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH20Q8N6Y1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms