Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 OR6D1P-202ENST00000641007 5290 ntBASIC18.17■□□□□ 0.5
APLFQ8IW19 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
APLFQ8IW19 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 LINC01238-205ENST00000567549 1107 ntBASIC18.16■□□□□ 0.5
APLFQ8IW19 WWOX-216ENST00000569818 525 ntBASIC18.16■□□□□ 0.5
APLFQ8IW19 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
APLFQ8IW19 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APLFQ8IW19 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
APLFQ8IW19 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
APLFQ8IW19 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APLFQ8IW19 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.15■□□□□ 0.5
APLFQ8IW19 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.15■□□□□ 0.5
APLFQ8IW19 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APLFQ8IW19 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.15■□□□□ 0.5
APLFQ8IW19 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.15■□□□□ 0.5
APLFQ8IW19 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.15■□□□□ 0.5
APLFQ8IW19 FAM87A-204ENST00000613235 858 ntBASIC18.15■□□□□ 0.5
APLFQ8IW19 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.15■□□□□ 0.5
APLFQ8IW19 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.15■□□□□ 0.5
APLFQ8IW19 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.15■□□□□ 0.5
APLFQ8IW19 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.15■□□□□ 0.5
APLFQ8IW19 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APLFQ8IW19 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
APLFQ8IW19 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APLFQ8IW19 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
APLFQ8IW19 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APLFQ8IW19 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.14■□□□□ 0.5
APLFQ8IW19 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
APLFQ8IW19 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APLFQ8IW19 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
APLFQ8IW19 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
APLFQ8IW19 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.14■□□□□ 0.49
APLFQ8IW19 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.14■□□□□ 0.49
APLFQ8IW19 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APLFQ8IW19 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
APLFQ8IW19 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms