Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 AC106820.2-201ENST00000563775 3264 ntBASIC16.32■□□□□ 0.2
LRRC28Q86X40 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 AL445675.2-201ENST00000620291 557 ntBASIC16.32■□□□□ 0.2
LRRC28Q86X40 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
LRRC28Q86X40 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AP003071.4-201ENST00000562276 1284 ntBASIC16.31■□□□□ 0.2
LRRC28Q86X40 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 AL645608.8-201ENST00000606034 2086 ntBASIC16.31■□□□□ 0.2
LRRC28Q86X40 AC141586.5-201ENST00000624546 2050 ntBASIC16.31■□□□□ 0.2
LRRC28Q86X40 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC28Q86X40 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC28Q86X40 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 NUDT16P1-203ENST00000513809 620 ntBASIC16.3■□□□□ 0.2
LRRC28Q86X40 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 AL031985.4-201ENST00000642138 673 ntBASIC16.3■□□□□ 0.2
LRRC28Q86X40 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC28Q86X40 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC28Q86X40 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC28Q86X40 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC28Q86X40 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms