Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 AC093010.1-201ENST00000473625 1624 ntBASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD1LQ86WJ1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 AC093827.2-201ENST00000512654 315 ntBASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 AC009065.1-201ENST00000564055 1225 ntBASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 AC024243.1-201ENST00000609234 778 ntBASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD1LQ86WJ1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD1LQ86WJ1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 HMGA1P5-201ENST00000412453 271 ntBASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms