Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ATP5G1P1-201ENST00000448724 379 ntBASIC16.18■□□□□ 0.18
RTTNQ86VV8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.18■□□□□ 0.18
RTTNQ86VV8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.18■□□□□ 0.18
RTTNQ86VV8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTTNQ86VV8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.18■□□□□ 0.18
RTTNQ86VV8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.18■□□□□ 0.18
RTTNQ86VV8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 KRT8P50-201ENST00000562022 1438 ntBASIC16.17■□□□□ 0.18
RTTNQ86VV8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTTNQ86VV8 SLC25A1P2-201ENST00000430693 912 ntBASIC16.17■□□□□ 0.18
RTTNQ86VV8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 YBX1P2-201ENST00000489612 999 ntBASIC16.17■□□□□ 0.18
RTTNQ86VV8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.17■□□□□ 0.18
RTTNQ86VV8 AL138966.2-201ENST00000621997 464 ntBASIC16.17■□□□□ 0.18
RTTNQ86VV8 AC135776.1-201ENST00000319817 2481 ntBASIC16.17■□□□□ 0.18
RTTNQ86VV8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 MIR4674-201ENST00000582457 87 ntBASIC16.16■□□□□ 0.18
RTTNQ86VV8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTTNQ86VV8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 HOXB1-202ENST00000577092 1414 ntBASIC16.16■□□□□ 0.18
RTTNQ86VV8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RTTNQ86VV8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 ESPNP-201ENST00000270691 2015 ntBASIC16.15■□□□□ 0.18
RTTNQ86VV8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTTNQ86VV8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.15■□□□□ 0.18
RTTNQ86VV8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms