Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RPSAP43-201ENST00000402237 625 ntBASIC19.18■□□□□ 0.66
ALYREFQ86V81 AL031284.1-201ENST00000419297 478 ntBASIC19.18■□□□□ 0.66
ALYREFQ86V81 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AKR1C7P-201ENST00000305623 895 ntBASIC19.17■□□□□ 0.66
ALYREFQ86V81 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC104819.1-201ENST00000504587 486 ntBASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC093909.1-201ENST00000504731 1122 ntBASIC19.17■□□□□ 0.66
ALYREFQ86V81 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALYREFQ86V81 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
ALYREFQ86V81 AC006333.2-201ENST00000607957 2099 ntBASIC19.16■□□□□ 0.66
ALYREFQ86V81 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 DRAXINP1-201ENST00000437611 948 ntBASIC19.16■□□□□ 0.66
ALYREFQ86V81 AC004967.1-201ENST00000453589 447 ntBASIC19.16■□□□□ 0.66
ALYREFQ86V81 TOB2P1-201ENST00000469761 992 ntBASIC19.16■□□□□ 0.66
ALYREFQ86V81 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 TP73-AS1-207ENST00000624167 988 ntBASIC19.16■□□□□ 0.66
ALYREFQ86V81 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALYREFQ86V81 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.16■□□□□ 0.66
ALYREFQ86V81 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ALYREFQ86V81 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
ALYREFQ86V81 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.15■□□□□ 0.66
ALYREFQ86V81 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALYREFQ86V81 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALYREFQ86V81 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALYREFQ86V81 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms