Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 FAM8A3P-201ENST00000427218 844 ntBASIC15.21■□□□□ 0.03
VPS13CQ709C8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
VPS13CQ709C8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS13CQ709C8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13CQ709C8 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.2■□□□□ 0.02
VPS13CQ709C8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13CQ709C8 RBM17P3-201ENST00000417687 1192 ntBASIC15.2■□□□□ 0.02
VPS13CQ709C8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13CQ709C8 HLA-J-201ENST00000462773 1622 ntBASIC15.2■□□□□ 0.02
VPS13CQ709C8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 KRT8P50-201ENST00000562022 1438 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 HEIH-201ENST00000623091 1652 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 DNAJB3-201ENST00000446806 729 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 AC021087.4-201ENST00000563761 564 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 MTDHP5-201ENST00000598980 586 ntBASIC15.19■□□□□ 0.02
VPS13CQ709C8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13CQ709C8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS13CQ709C8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13CQ709C8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13CQ709C8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 AC009947.1-201ENST00000444350 727 ntBASIC15.18■□□□□ 0.02
VPS13CQ709C8 HLA-J-202ENST00000469281 1241 ntBASIC15.18■□□□□ 0.02
VPS13CQ709C8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13CQ709C8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13CQ709C8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13CQ709C8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 AC023274.1-201ENST00000418278 595 ntBASIC15.18■□□□□ 0.02
VPS13CQ709C8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13CQ709C8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms