Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 AC007613.1-201ENST00000572811 2597 ntBASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 SLC25A6P5-201ENST00000435663 894 ntBASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COLCA1Q6ZS62 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 KRT89P-201ENST00000620027 1478 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 RNF152P1-201ENST00000397754 604 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 TSPY5P-201ENST00000426936 936 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 AC006011.2-201ENST00000621313 1158 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 AC079602.3-201ENST00000623931 403 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 NOC2LP2-201ENST00000407594 1944 ntBASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
COLCA1Q6ZS62 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SPDYE15P-201ENST00000424157 909 ntBASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 HLA-F-220ENST00000434407 884 ntBASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms